PhD
Martin Kapun
Staff scientist - Bioinformatics
- Bioinformatics and biostatistics support & training
- Software development (UNIX, Python, R)
- Research in populationsgenomics and phylogenetics
- Data-management und development of hard- und software-based infrastructure
- Development of open science und open data policies
Martin Kapuns ORCID record:
Education
- 2008-2013: PhD, Vetmeduni Vienna, Austria: The genetic basis of adaptation in Drosophila melanogaster; Advisors: Prof. Christian Schlötterer & Prof. Thomas Flatt
- 2004-2007: MSc (Magister rerum naturalis), Ecology, University of Vienna, Austria: The genetic structure of Slovakian Bee-eaters (Merops apiaster): Microsatellite differentiation between individuals and colonies; Advisors: Dr. Christian Schultze & Prof. Konrad Fiedler
- 1999-2004: BSc (Bacchalaureus rerum naturalis), Biodiversity and Ecology, Karl Franzens University Graz, Austria
Professional History
- Since July 2021: Bioinformatician at the Natural History Museum of Vienna, Austria
- since 2019: Group Leader at Department of Cell and Developmental Biology, Medical University of Vienna, Austria
- 2019 -2021: Group Leader at the Department of Evolutionary Biology and Environmental Studies with Prof. Wolf Blanckenhorn, University of Zürich, Switzerland
- 2019: Bioinformatics specialist with Prof. Tadeusz Kawecki, Department of Ecology and Evolution, University of Lausanne, Switzerland
- 2013-2018: Postdoctoral Research Associate with Prof. Thomas Flatt, Department of Ecology and Evolution, University of Lausanne, Switzerland & Department of Biology, Ecology and Evolution, University of Fribourg, Switzerland
- 2008-2013: PhD Student with Prof. Christian Schlötterer, Institute for population genetics, Vetmeduni Vienna, Austria
- 2007-2008: Research Assistant with Prof. Dr. Hans Winkler: Population genetic studies of migratory birds, European beavers and phylogeny of Piciformes, Konrad Lorenz Institute for Ethology, Austrian Academy of Sciences, Vienna, Austria
Grants
- 2019-2022: WF standalone grant (P 32275; € 464.870,70): Keep cool: The Influence of Symbionts on Thermal Preference
- 2016-2018: 3x ESEB STN Travel Awards
- 2013: PhD diploma with distinction
- 2009-2010: DOC-Fellowship, Austrian Academy of Science
- 2008: Merit Scholarship, University of Vienna
- 2008: Master thesis with distinction
Academic Teaching
Student and Postdoc SupervisionPostdoc (1); PhD students (3); master students (3)
Lectures and exercise courses
- 2020: Ecology block course (Bio329); UZH Zürich (lecturer)
Insect Reproduction block course (Bio310); UZH Zürich (main organizer & lecturer) - 2019: Animal behavior block course (Bio352); UZH ZÜRICH (lecturer)
Evolution practicum (Bio116); UZH Zürich - 2017: Practical Course in Molecular Genetics (main organizer & lecturer)
Drosophila Genetics TP, UNIL Lausanne - 2016: Practical
Course in Molecular Genetics (main organizer & lecturer)
Drosophila Genetics TP, UNIL Lausanne - 2015: Experimental Design Course; UNIL Lausanne (main lecturer)
Drosophila Genetics TP, UNIL Lausanne (main organizer & lecturer) - 2015: NGS Workshop 2015: Introduction to bioinformatics with Python and data analysis using next generation sequencing (NGS), UNIL Lausanne (main organizer & main lecturer)
- 2014: Experimental Design Course; UNIL Lausanne
Bioinformatics TP, UNIL Lausanne
Introduction to Scientific Writing, UNIL Lausanne - 2012: PhD student Introductory Course 2012: Introduction to bioinformatics programming with Python and data analysis using next generation sequencing (NGS), Vetmeduni Vienna (lecturer)
- 2011: Introduction to Scientific Writing, UNIL Lausanne
Einführung in die Biostatistik, Vetmeduni Vienna (main organizer)
NGS Workshop 2011: De novo assembly, a brief introduction to ABySS, Vetmeduni Vienna (lecturer)
Researchgate:
https://www.researchgate.net/profile/Martin-Kapun
GitHub:
https://github.com/capoony
Twitter: @capoony
Central Research Laboratories
Achleitner-Goulding Tricia
Staff
scientist
Ackerl Florian
ABOL-coordination team
De Mattia Willy
Associated
scientist
Efthymiadis Georgios
project researcher „FWF PAT1494723 Garra“
Fischer
Iris
Laboratory manager
Haring Elisabeth
Associated
scientist
Heinzl Janine
ABOL-coordination team
Kargl Victoria
ABOL-coordination
team (currently not at the museum)
Kirchner Sandra
Staff scientist, Laboratory manager
Kroh Andreas
Vice CEO Science; Head of department
Kruckenhauser Luise
Head of the DNA Laboratory / Curator of the DNA- and tissue collection / Staff scientist
Macek Oliver
Collection manager
Prost Stefan
Associate scientist
Sittenthaler Marcia
Associated scientist
Sonnleitner Michaela
ABOL-coordination team
Stöckle Gabriel
Staff scientist
Szucsich Nikolaus
ABOL-coordinator
Wanka Alexandra Julia
Laboratory manager
Wegner Wencke
Operator for microanalysis
Winkler Viola
Operator microCT and 3D lab